STRINGSTRING
Solyc10g079110.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g079110.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g079110.1.1Uncharacterized protein (382 aa)    
Predicted Functional Partners:
Solyc09g083330.2.1
Phosphatidate cytidylyltransferase (424 aa)
   
 
  0.960
Solyc03g005410.2.1
Phosphatidate cytidylyltransferase (426 aa)
   
 
  0.960
Solyc01g090940.2.1
Phosphatidate cytidylyltransferase (416 aa)
   
 
  0.960
GPAT
Glycerol-3-phosphate acyltransferase (470 aa)
         
  0.952
Solyc08g082340.2.1
Uncharacterized protein (371 aa)
         
  0.947
Solyc10g084540.1.1
Uncharacterized protein (1563 aa)
       
  0.933
Solyc09g005910.2.1
Uncharacterized protein (892 aa)
       
  0.933
Solyc04g079100.2.1
Uncharacterized protein (965 aa)
       
  0.933
Solyc12g011170.1.1
Phospholipase D ; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond (848 aa)
     
  0.913
Solyc10g024370.1.1
Phospholipase D ; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond (839 aa)
     
  0.913
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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