STRINGSTRING
Solyc10g079290.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g079290.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g079290.1.1Uncharacterized protein (702 aa)    
Predicted Functional Partners:
Solyc07g009320.2.1
Uncharacterized protein (326 aa)
     
  0.915
Solyc02g044050.1.1
Uncharacterized protein (491 aa)
   
   
  0.700
Solyc12g099800.1.1
Uncharacterized protein (303 aa)
   
 
  0.649
Solyc06g082800.2.1
Uncharacterized protein (312 aa)
     
  0.635
Solyc06g007710.2.1
Uncharacterized protein (314 aa)
     
  0.635
Solyc12g036200.1.1
Peptidylprolyl isomerase (178 aa)
   
 
  0.629
Solyc02g062250.2.1
Peptidylprolyl isomerase (127 aa)
   
 
  0.629
Solyc01g110530.2.1
Peptidylprolyl isomerase (118 aa)
   
 
  0.629
Solyc03g031560.2.1
Uncharacterized protein (318 aa)
 
   
  0.602
Solyc09g074940.1.1
Uncharacterized protein (1403 aa)
       
 
  0.600
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (20%) [HD]