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Solyc10g079440.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g079440.1.1" - FAD-dependent oxidoreductase family protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g079440.1.1FAD-dependent oxidoreductase family protein (424 aa)    
Predicted Functional Partners:
Solyc02g062430.2.1
FAD-linked oxidases family protein (589 aa)
   
   
  0.790
101260902
annotation not available (514 aa)
   
   
  0.759
101258079
annotation not available (511 aa)
   
   
  0.759
Solyc01g073740.2.1
annotation not available (474 aa)
   
   
  0.759
101254542
annotation not available (267 aa)
           
  0.699
Solyc05g054640.2.1
annotation not available (954 aa)
   
   
  0.690
101264112
annotation not available (1020 aa)
   
   
  0.690
101244162
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress (331 aa)
           
  0.664
101257228
annotation not available (332 aa)
           
  0.664
101267346
Uncharacterized protein; Pyruvate orthophosphate dikinase (965 aa)
   
   
  0.656
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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