STRINGSTRING
Solyc10g079440.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g079440.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g079440.1.1Uncharacterized protein (424 aa)    
Predicted Functional Partners:
Solyc12g099260.1.1
Uncharacterized protein (608 aa)
   
 
  0.794
Solyc01g059880.2.1
Uncharacterized protein (608 aa)
   
 
  0.794
Solyc03g117490.2.1
Uncharacterized protein (522 aa)
       
  0.567
Solyc12g011000.1.1
Citrate synthase (514 aa)
   
 
  0.547
Solyc07g055840.2.1
Citrate synthase (511 aa)
   
 
  0.547
Solyc01g073740.2.1
Citrate synthase (474 aa)
   
 
  0.547
Solyc02g062430.2.1
Uncharacterized protein (589 aa)
   
   
  0.539
Solyc02g094090.2.1
Uncharacterized protein (696 aa)
 
            0.488
Solyc03g120470.2.1
MIP (1264 aa)
         
  0.473
Solyc04g015490.2.1
Mg-protoporphyrin IX chelatase ; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX (766 aa)
              0.465
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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