STRINGSTRING
Solyc10g079510.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g079510.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g079510.1.1Uncharacterized protein (1243 aa)    
Predicted Functional Partners:
GTF2H2
General transcription factor IIH, polypeptide 2, 44kDa (316 aa)
     
  0.934
Solyc02g078440.2.1
Uncharacterized protein (453 aa)
     
  0.933
Solyc08g081280.2.1
Uncharacterized protein (419 aa)
     
  0.932
Solyc10g005900.2.1
Uncharacterized protein (608 aa)
     
  0.931
Solyc03g119790.2.1
Uncharacterized protein (472 aa)
     
  0.930
Solyc06g071450.2.1
Uncharacterized protein (290 aa)
     
  0.930
Solyc04g071310.2.1
Uncharacterized protein (188 aa)
       
  0.930
Solyc08g079610.2.1
Uncharacterized protein (70 aa)
       
  0.929
Solyc06g064890.2.1
Uncharacterized protein (250 aa)
       
  0.928
Solyc12g088030.1.1
Transcription initiation factor IIA subunit 2 ; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation (106 aa)
       
    0.928
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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