STRINGSTRING
Solyc10g079740.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g079740.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g079740.1.1Uncharacterized protein (305 aa)    
Predicted Functional Partners:
Solyc06g083100.1.1
Uncharacterized protein (597 aa)
     
  0.908
Solyc06g083090.2.1
Uncharacterized protein (615 aa)
     
  0.908
Solyc03g118440.1.1
Uncharacterized protein (133 aa)
       
      0.900
Solyc12g005050.1.1
Uncharacterized protein (427 aa)
     
  0.898
Solyc03g079920.2.1
Uncharacterized protein (787 aa)
     
 
  0.546
Solyc03g111380.2.1
Tubulin gamma chain ; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome (474 aa)
         
  0.539
Solyc08g013990.2.1
Uncharacterized protein (289 aa)
           
  0.533
NMP1
Nuclear matrix protein 1 (331 aa)
           
  0.480
Solyc12g095870.1.1
Uncharacterized protein (295 aa)
     
 
  0.477
Solyc08g066050.2.1
Uncharacterized protein (303 aa)
     
 
  0.477
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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