STRINGSTRING
Solyc10g080390.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g080390.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g080390.1.1Uncharacterized protein (631 aa)    
Predicted Functional Partners:
Solyc01g009300.2.1
Uncharacterized protein (997 aa)
       
0.612
Solyc01g067490.2.1
Uncharacterized protein (561 aa)
     
 
    0.537
Solyc07g053820.2.1
Uncharacterized protein (529 aa)
     
 
  0.532
Solyc06g051040.2.1
Uncharacterized protein (588 aa)
     
 
  0.532
Solyc02g079050.2.1
Uncharacterized protein (769 aa)
     
 
  0.530
Solyc02g062680.2.1
Anaphase-promoting complex subunit 10 ; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle (191 aa)
     
 
    0.522
Solyc05g007750.2.1
Uncharacterized protein (883 aa)
     
 
    0.520
Solyc01g096490.2.1
Uncharacterized protein (1633 aa)
       
 
  0.519
Solyc04g082900.2.1
Uncharacterized protein (389 aa)
     
 
    0.516
Solyc01g102550.2.1
Uncharacterized protein (406 aa)
     
 
    0.511
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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