• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc10g080870.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g080870.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g080870.2.1annotation not available (510 aa)    
Predicted Functional Partners:
Solyc03g121510.2.1
Uncharacterized protein; Cytochrome P450, family 90, subfamily D, polypeptide 1 (465 aa)
   
     
  0.548
101254924
Uncharacterized protein; Cytochrome P450, family 711, subfamily A, polypeptide 1 (519 aa)
   
   
  0.536
Solyc10g007930.2.1
annotation not available (390 aa)
   
     
  0.488
Solyc10g007900.2.1
annotation not available (390 aa)
   
     
  0.488
101259587
annotation not available (575 aa)
       
 
  0.453
101244420
Uncharacterized protein; Glutamyl/glutaminyl-tRNA synthetase, class Ic; Belongs to the class-I aminoacyl-tRNA synthetase family (740 aa)
           
  0.441
101268279
annotation not available (512 aa)
   
          0.430
101261488
annotation not available (487 aa)
   
          0.429
101260843
annotation not available (201 aa)
           
  0.420
101262800
Pre-mRNA cleavage complex II protein family (374 aa)
           
  0.420
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (14%) [HD]