STRINGSTRING
Solyc10g080870.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g080870.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g080870.2.1Uncharacterized protein (510 aa)    
Predicted Functional Partners:
Solyc08g062950.2.1
Uncharacterized protein (519 aa)
   
     
  0.716
Solyc10g087030.1.1
Uncharacterized protein (511 aa)
   
     
  0.661
Solyc10g087010.1.1
Uncharacterized protein (510 aa)
   
     
  0.661
Solyc02g082070.2.1
Uncharacterized protein (504 aa)
   
     
  0.661
Solyc08g080390.2.1
Uncharacterized protein (481 aa)
   
     
  0.661
CYP51
Obtusifoliol 14alpha-demethylase (487 aa)
   
   
  0.632
Solyc04g077440.2.1
Uncharacterized protein (525 aa)
     
 
  0.596
bc2.1
Squalene epoxidase 3-like (EC-1.14.13.132) (463 aa)
     
 
  0.596
Solyc11g068430.1.1
Putative ferredoxin (124 aa)
     
  0.570
Solyc11g065640.1.1
Uncharacterized protein (216 aa)
     
  0.570
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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