STRINGSTRING
Solyc10g081060.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g081060.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g081060.1.1annotation not available (223 aa)    
Predicted Functional Partners:
104647326
Vesicle transport v-SNARE family protein (221 aa)
     
  0.985
101266321
annotation not available (221 aa)
     
  0.985
101259553
annotation not available (199 aa)
     
  0.982
101266728
annotation not available (778 aa)
       
 
  0.920
101268609
annotation not available (777 aa)
       
 
  0.920
Solyc06g005080.2.1
Uncharacterized protein; Zinc ion binding (1067 aa)
       
 
  0.916
101266422
annotation not available (289 aa)
     
 
  0.903
Solyc05g052310.2.1
annotation not available (243 aa)
     
 
  0.903
101263154
Uncharacterized protein; Syntaxin of plants 42; Belongs to the syntaxin family (319 aa)
     
 
  0.896
101265370
annotation not available (324 aa)
     
 
  0.896
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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