STRINGSTRING
Solyc10g081180.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g081180.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g081180.1.1Uncharacterized protein (220 aa)    
Predicted Functional Partners:
Solyc07g039550.2.1
Uncharacterized protein (1190 aa)
     
  0.952
Solyc01g110990.2.1
Uncharacterized protein (1111 aa)
     
  0.952
Solyc09g090660.2.1
Uncharacterized protein (521 aa)
     
  0.930
Solyc03g117940.2.1
Uncharacterized protein (286 aa)
       
  0.922
Solyc01g094540.2.1
Small nuclear ribonucleoprotein-associated protein (280 aa)
     
  0.912
Solyc02g076720.2.1
Uncharacterized protein (1459 aa)
   
      0.908
Solyc02g078970.2.1
Uncharacterized protein (570 aa)
       
  0.906
Solyc01g107270.2.1
Uncharacterized protein (1333 aa)
   
      0.903
cdc5
CDC5-like protein (987 aa)
     
  0.901
Solyc08g074440.2.1
Uncharacterized protein (639 aa)
       
  0.898
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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