STRINGSTRING
Solyc10g081230.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g081230.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g081230.1.1Uncharacterized protein (113 aa)    
Predicted Functional Partners:
Solyc11g011480.1.1
Uncharacterized protein (670 aa)
     
  0.972
Solyc06g016760.1.1
Uncharacterized protein (114 aa)
       
  0.970
Solyc06g073410.2.1
Uncharacterized protein (253 aa)
     
  0.949
Solyc08g062770.2.1
Uncharacterized protein (554 aa)
       
 
  0.669
Solyc03g121870.2.1
Uncharacterized protein (268 aa)
       
 
  0.669
Solyc12g062870.1.1
Uncharacterized protein (410 aa)
       
  0.569
Solyc10g037910.1.1
Uncharacterized protein (235 aa)
       
  0.569
Solyc07g055200.2.1
Uncharacterized protein (437 aa)
       
  0.569
Solyc06g082640.2.1
Uncharacterized protein (225 aa)
       
  0.569
Solyc05g051050.2.1
Uncharacterized protein (466 aa)
       
  0.569
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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