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Solyc10g081230.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g081230.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g081230.1.1Uncharacterized protein; Presenilin-1 (113 aa)    
Predicted Functional Partners:
101263777
Zn-dependent exopeptidases superfamily protein (670 aa)
     
 
  0.979
101249370
Uncharacterized protein; INVOLVED IN- positive regulation of catalytic activity, protein processing; LOCATED IN- integral to membrane; EXPRESSED IN- 24 plant structures; EXPRESSED DURING- 15 growth stages; CONTAINS InterPro DOMAIN/s- Aph-1 (InterPro-IPR009294); Has 268 Blas /.../ to 262 proteins in 79 species- Archae - 0; Bacteria - 0; Metazoa - 212; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 22 (source- NCBI BLink) (253 aa)
     
 
  0.971
Solyc06g016760.1.1
Uncharacterized protein; CONTAINS InterPro DOMAIN/s- Gamma-secretase aspartyl protease complex, presenilin enhancer-2 subunit (InterPro-IPR019379); Has 168 Blast hits to 168 proteins in 71 species- Archae - 0; Bacteria - 0; Metazoa - 126; Fungi - 0; Plants - 36; Viruses - 0 /.../r Eukaryotes - 6 (source- NCBI BLink) (114 aa)
     
 
  0.970
ide
Uncharacterized protein; Insulin degrading enzyme ; Belongs to the peptidase M16 family (971 aa)
     
   
  0.805
app1
Xaa-Pro aminopeptidase 1 ; Belongs to the peptidase M24B family (655 aa)
           
  0.801
101244763
annotation not available (975 aa)
     
   
  0.776
101252645
Methyltransferase family protein (333 aa)
       
 
  0.714
101252206
Uncharacterized protein; S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (554 aa)
       
 
  0.714
Solyc03g121870.2.1
annotation not available (268 aa)
       
 
  0.714
101246990
Unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source- NCBI BLink) (313 aa)
           
  0.691
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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