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STRINGSTRING
101256637 protein (Solanum lycopersicum) - STRING interaction network
"101256637" - DNA binding in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101256637DNA binding;nucleotide binding;nucleic acid binding;DNA-directed DNA polymerases;DNA-directed DNA polymerases (1086 aa)    
Predicted Functional Partners:
Solyc03g063340.2.1
Uncharacterized protein; DNA polymerase delta small subunit (430 aa)
     
  0.999
101258997
Uncharacterized protein; DNA-directed DNA polymerases (542 aa)
     
  0.998
pcna
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (264 aa)
   
 
  0.997
101259745
DNA polymerase alpha subunit B; May play an essential role at the early stage of chromosomal DNA replication by coupling the polymerase alpha/primase complex to the cellular replication machinery (617 aa)
     
 
  0.994
101266715
DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication (459 aa)
     
 
  0.993
101258292
DNA primases;DNA primases; Belongs to the eukaryotic-type primase small subunit family (454 aa)
     
 
  0.992
101255630
annotation not available (120 aa)
       
  0.991
101262116
annotation not available (130 aa)
       
  0.991
Solyc03g098250.2.1
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication (529 aa)
     
 
  0.991
101268250
DNA helicase; Minichromosome maintenance (MCM2/3/5) family protein; Belongs to the MCM family (787 aa)
     
 
  0.990
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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