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STRINGSTRING
101251046 protein (Solanum lycopersicum) - STRING interaction network
"101251046" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101251046annotation not available (146 aa)    
Predicted Functional Partners:
Fni3
annotation not available (153 aa)
     
 
  0.947
101267016
Ubiquitin thioesterase; CONTAINS InterPro DOMAIN/s- Ovarian tumour, otubain (InterPro-IPR003323), Ubiquitin thioesterase Otubain (InterPro-IPR016615), Peptidase C65, otubain (InterPro-IPR019400); Has 413 Blast hits to 411 proteins in 139 species- Archae - 0; Bacteria - 0; /.../a - 184; Fungi - 83; Plants - 88; Viruses - 0; Other Eukaryotes - 58 (source- NCBI BLink) (301 aa)
     
 
  0.902
UBC1
Ubiquitin conjugating enzyme ; Belongs to the ubiquitin-conjugating enzyme family (194 aa)
     
 
  0.874
101254909
Carboxyl terminus of HSC70-interacting protein (276 aa)
     
 
  0.866
101266186
annotation not available (181 aa)
     
 
  0.827
Solyc03g118550.2.1
annotation not available (386 aa)
     
 
  0.822
Solyc08g083120.2.1
Uncharacterized protein; Ubiquitin (128 aa)
     
 
  0.811
Solyc08g008590.2.1
annotation not available (136 aa)
     
 
  0.811
Solyc06g053210.2.1
annotation not available (188 aa)
     
 
  0.811
101264240
Ubiquitin (128 aa)
     
 
  0.811
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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