STRINGSTRING
Solyc10g083200.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g083200.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g083200.1.1Uncharacterized protein (672 aa)    
Predicted Functional Partners:
Solyc09g008470.2.1
Uncharacterized protein (345 aa)
       
  0.732
Solyc07g039550.2.1
Uncharacterized protein (1190 aa)
     
    0.623
Solyc01g110990.2.1
Uncharacterized protein (1111 aa)
     
    0.623
Solyc02g076720.2.1
Uncharacterized protein (1459 aa)
       
      0.597
Solyc01g107270.2.1
Uncharacterized protein (1333 aa)
       
      0.597
Solyc12g035870.1.1
Uncharacterized protein (398 aa)
     
 
    0.586
Solyc11g005110.1.1
Uncharacterized protein (523 aa)
     
 
    0.520
Solyc04g008680.2.1
Uncharacterized protein (1363 aa)
     
    0.446
Solyc01g100060.2.1
Uncharacterized protein (381 aa)
     
    0.445
Solyc11g008470.1.1
Uncharacterized protein (499 aa)
     
    0.438
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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