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STRINGSTRING
LIN8 protein (Solanum lycopersicum) - STRING interaction network
"LIN8" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIN8Uncharacterized protein; Cell-wall invertase ; Belongs to the glycosyl hydrolase 32 family (589 aa)    
Predicted Functional Partners:
101267720
Sucrose synthase; Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways (803 aa)
         
  0.922
LOC543961
Sucrose synthase; Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways (805 aa)
         
  0.921
sus3
Sucrose synthase; Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways (805 aa)
         
  0.921
SUS4
Sucrose synthase; Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways (812 aa)
         
  0.916
101255377
Sucrose synthase; Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways (891 aa)
         
  0.903
Solyc02g081300.2.1
Sucrose synthase; Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways (884 aa)
         
  0.903
101249034
Phosphotransferase; Hexokinase-like 3; Belongs to the hexokinase family (491 aa)
         
  0.833
FRK4
Fructokinase ; Belongs to the carbohydrate kinase PfkB family (375 aa)
 
   
  0.827
101251735
Beta-glucosidase; Beta glucosidase 42 (504 aa)
         
  0.821
hxk1
Phosphotransferase; Hexokinase ; Belongs to the hexokinase family (498 aa)
         
  0.792
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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