STRINGSTRING
Solyc10g083700.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g083700.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g083700.2.1Uncharacterized protein (518 aa)    
Predicted Functional Partners:
Solyc12g011160.1.1
Uncharacterized protein (384 aa)
         
  0.732
Solyc08g081550.2.1
1-aminocyclopropane-1-carboxylate synthase (472 aa)
     
   
  0.703
Solyc12g044330.1.1
Uncharacterized protein (248 aa)
           
  0.700
Solyc10g084400.1.1
Uncharacterized protein (235 aa)
           
  0.700
Solyc06g074530.1.1
Arogenate dehydratase ; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine (433 aa)
           
  0.700
Solyc02g082450.2.1
Uncharacterized protein (405 aa)
           
  0.700
Solyc10g007930.2.1
Uncharacterized protein (390 aa)
   
     
  0.660
Solyc10g007900.2.1
Uncharacterized protein (390 aa)
   
     
  0.659
Solyc11g068430.1.1
Putative ferredoxin (124 aa)
     
  0.570
Solyc11g065640.1.1
Uncharacterized protein (216 aa)
     
  0.570
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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