STRINGSTRING
Solyc10g083770.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g083770.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g083770.1.1Uncharacterized protein (333 aa)    
Predicted Functional Partners:
Solyc12g036410.1.1
Uncharacterized protein (588 aa)
     
 
  0.956
Solyc03g119290.2.1
Uncharacterized protein (588 aa)
     
 
  0.956
Solyc06g069020.2.1
Uncharacterized protein (534 aa)
     
 
  0.945
Solyc03g118990.1.1
Uncharacterized protein (70 aa)
     
 
  0.945
Solyc03g118980.2.1
Uncharacterized protein (162 aa)
     
 
  0.945
Solyc11g069700.1.1
Elongation factor 1-alpha ; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (447 aa)
     
 
  0.908
LOC544055
Elongation factor 1-alpha ; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (448 aa)
     
 
  0.908
Solyc06g009960.1.1
Uncharacterized protein (410 aa)
     
 
  0.908
Solyc06g005060.2.1
Elongation factor 1-alpha (448 aa)
     
 
  0.908
PELOTA
Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non-functional ribosomes and degrade damaged mRNAs (378 aa)
   
   
 
0.810
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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