STRINGSTRING
Solyc10g083780.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g083780.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g083780.1.1Uncharacterized protein (233 aa)    
Predicted Functional Partners:
Solyc03g031750.1.1
Uncharacterized protein (209 aa)
     
  0.978
Solyc02g080270.2.1
Uncharacterized protein (274 aa)
     
  0.978
Solyc10g085590.1.1
Uncharacterized protein (403 aa)
     
  0.974
Solyc09g065770.1.1
Uncharacterized protein (350 aa)
     
  0.974
Solyc09g009270.1.1
Uncharacterized protein (404 aa)
     
  0.974
Solyc11g008020.1.1
Uncharacterized protein (216 aa)
       
      0.813
Solyc10g086310.1.1
Uncharacterized protein (209 aa)
       
      0.813
Solyc09g008460.2.1
Uncharacterized protein (216 aa)
       
      0.813
Solyc04g064510.2.1
Uncharacterized protein (209 aa)
       
      0.813
Solyc10g085810.1.1
Uncharacterized protein (234 aa)
         
 
0.800
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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