STRINGSTRING
Solyc10g084040.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g084040.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g084040.1.1Uncharacterized protein (219 aa)    
Predicted Functional Partners:
Solyc08g083360.2.1
Uncharacterized protein (192 aa)
   
        0.587
Solyc03g082890.2.1
Uncharacterized protein (233 aa)
   
        0.571
Solyc03g114930.2.1
Uncharacterized protein (246 aa)
   
        0.540
Solyc09g064500.2.1
Photosystem II reaction center Psb28 protein (180 aa)
   
        0.531
Solyc06g073290.1.1
Uncharacterized protein (263 aa)
   
        0.511
Solyc03g111700.2.1
Uncharacterized protein (337 aa)
   
        0.508
Solyc02g086910.2.1
Uncharacterized protein (451 aa)
   
        0.504
Solyc08g015620.2.1
Uncharacterized protein (276 aa)
   
          0.503
Solyc02g068930.2.1
Uncharacterized protein (179 aa)
   
        0.496
Solyc11g051050.1.1
Uncharacterized protein (62 aa)
   
        0.494
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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