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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
101250649 protein (Solanum lycopersicum) - STRING interaction network
"101250649" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101250649annotation not available (462 aa)    
Predicted Functional Partners:
Solyc10g084380.1.1
Uncharacterized protein; WRKY family transcription factor family protein (422 aa)
       
 
  0.775
SlHAM
annotation not available (474 aa)
       
 
  0.766
Solyc12g062940.1.1
annotation not available (454 aa)
           
  0.763
Solyc12g019050.1.1
annotation not available (352 aa)
           
  0.763
101251319
Uncharacterized protein; ABC transporter 1 (604 aa)
           
  0.748
101245317
D-Tyr-tRNA(Tyr) deacylase family protein (153 aa)
           
  0.746
101246493
annotation not available (462 aa)
       
      0.706
Solyc05g051060.2.1
annotation not available (284 aa)
       
      0.706
101246132
annotation not available (174 aa)
       
      0.706
Solyc01g056800.1.1
annotation not available (163 aa)
           
  0.670
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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