STRINGSTRING
Solyc10g084350.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g084350.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g084350.1.1Uncharacterized protein (206 aa)    
Predicted Functional Partners:
rps3
30S ribosomal protein S3, chloroplastic (352 aa)
   
  0.999
Solyc11g021130.1.1
Ribosomal protein S7 (285 aa)
   
  0.999
RPL3
Ribosomal protein L3 (389 aa)
   
  0.998
Solyc01g103510.2.1
Uncharacterized protein (443 aa)
   
  0.998
Solyc12g010930.1.1
Uncharacterized protein (181 aa)
   
  0.998
Solyc10g007980.2.1
Annotation not available (181 aa)
   
  0.998
Solyc07g055230.2.1
Annotation not available (181 aa)
   
  0.998
Solyc04g080150.1.1
Uncharacterized protein (98 aa)
   
  0.998
Solyc02g086240.2.1
Annotation not available (181 aa)
   
  0.998
Solyc12g005330.1.1
Uncharacterized protein (260 aa)
   
  0.998
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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