STRINGSTRING
Solyc10g084810.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g084810.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g084810.1.1Uncharacterized protein (72 aa)    
Predicted Functional Partners:
Solyc00g042140.1.1
Annotation not available (399 aa)
              0.461
Solyc00g042130.1.1
Annotation not available (704 aa)
              0.459
Solyc01g087500.2.1
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1478 aa)
         
  0.448
Solyc11g066110.1.1
Uncharacterized protein (447 aa)
   
 
  0.402
Solyc11g018740.1.1
Uncharacterized protein (302 aa)
   
 
  0.402
Solyc11g018720.1.1
Uncharacterized protein (251 aa)
   
 
  0.402
Solyc11g013080.1.1
Uncharacterized protein (74 aa)
   
 
  0.402
Solyc11g013070.1.1
Uncharacterized protein (364 aa)
   
 
  0.402
Solyc08g082300.2.1
Uncharacterized protein (146 aa)
   
 
  0.402
Solyc08g082290.2.1
Uncharacterized protein (200 aa)
   
 
  0.402
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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