STRINGSTRING
Solyc10g085100.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g085100.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g085100.1.1Uncharacterized protein (504 aa)    
Predicted Functional Partners:
SQD1
UDP-sulfoquinovose synthase (480 aa)
   
 
  0.960
Solyc12g009820.1.1
Uncharacterized protein (455 aa)
   
 
  0.940
Solyc07g007620.2.1
Uncharacterized protein (455 aa)
   
 
  0.940
Solyc08g006640.2.1
Uncharacterized protein (532 aa)
       
  0.930
Solyc12g008970.1.1
O-acyltransferase (463 aa)
     
 
  0.912
Solyc07g040740.2.1
O-acyltransferase (514 aa)
     
 
  0.912
Solyc10g084540.1.1
Uncharacterized protein (1563 aa)
     
 
    0.903
Solyc09g005910.2.1
Uncharacterized protein (892 aa)
     
 
    0.902
Solyc04g079100.2.1
Uncharacterized protein (965 aa)
     
 
    0.902
Solyc12g039180.1.1
Diacylglycerol kinase (737 aa)
     
 
    0.900
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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