STRINGSTRING
Solyc10g085180.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g085180.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g085180.1.1Uncharacterized protein (240 aa)    
Predicted Functional Partners:
Solyc01g096950.2.1
Uncharacterized protein (523 aa)
       
 
  0.942
Solyc11g065370.1.1
Uncharacterized protein (446 aa)
     
 
  0.941
Solyc09g098260.1.1
Uncharacterized protein (588 aa)
     
 
  0.849
Solyc07g052940.2.1
Uncharacterized protein (2418 aa)
     
 
  0.849
Solyc03g112690.1.1
Uncharacterized protein (644 aa)
     
 
  0.849
Solyc03g083410.2.1
Uncharacterized protein (981 aa)
     
 
  0.849
Solyc01g095890.2.1
Uncharacterized protein (1048 aa)
     
 
  0.849
Solyc01g006880.2.1
Uncharacterized protein (1596 aa)
     
 
  0.849
Solyc12g035360.1.1
Uncharacterized protein (333 aa)
       
 
  0.835
Solyc02g083940.2.1
Uncharacterized protein (332 aa)
       
 
  0.835
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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