STRINGSTRING
Solyc10g085690.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g085690.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g085690.1.1Uncharacterized protein (357 aa)    
Predicted Functional Partners:
Solyc10g045310.1.1
Uncharacterized protein (229 aa)
   
          0.498
Solyc11g071890.1.1
Uncharacterized protein (360 aa)
   
          0.483
Solyc08g081080.2.1
Uncharacterized protein (277 aa)
   
          0.477
Solyc12g035880.1.1
Uncharacterized protein (151 aa)
   
          0.446
Solyc01g008070.2.1
Uncharacterized protein (432 aa)
   
          0.427
Solyc07g066620.2.1
Uncharacterized protein (358 aa)
   
          0.414
Solyc07g042820.2.1
Uncharacterized protein (179 aa)
   
          0.408
Solyc04g049390.2.1
Uncharacterized protein (310 aa)
   
          0.404
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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