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STRINGSTRING
101252541 protein (Solanum lycopersicum) - STRING interaction network
"101252541" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101252541annotation not available (508 aa)    
Predicted Functional Partners:
Solyc05g013790.2.1
annotation not available (577 aa)
     
 
  0.966
cdc5
CDC5-like protein (987 aa)
     
      0.859
Xpo1
Exportin-1 (1075 aa)
     
 
  0.833
101250741
ARM repeat superfamily protein (1199 aa)
     
 
  0.833
101261518
Uncharacterized protein; THO2 (1858 aa)
     
   
  0.816
101261751
bZIP transcription factor family protein (454 aa)
           
  0.805
101258168
Transcriptional adapter; Homolog of yeast ADA2 2A (560 aa)
     
   
  0.802
101248576
Uncharacterized protein; Nuclear transport factor 2A (123 aa)
     
   
  0.798
101264928
DEA(D/H)-box RNA helicase family protein (559 aa)
   
 
  0.790
Solyc11g045180.1.1
annotation not available (181 aa)
   
 
  0.789
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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