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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
ANT1 protein (Solanum lycopersicum) - STRING interaction network
"ANT1" - Anthocyanin 1 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANT1Anthocyanin 1 (274 aa)    
Predicted Functional Partners:
101256795
annotation not available (626 aa)
       
 
  0.844
THox2
Homeobox 2 protein (310 aa)
     
 
  0.745
HY5
Transcription factor HY5; Transcription factor that promotes photomorphogenesis in the light and positively regulates fruit pigmentation and fruit nutritional quality. Probably acts downstream of the light receptor network and directly affects transcription of light- induced genes (158 aa)
       
 
  0.705
AH
Basic helix-loop-helix (bHLH) DNA-binding superfamily protein (680 aa)
           
  0.575
F3H
Uncharacterized protein; Flavanone 3 beta-hydroxylase ; Belongs to the iron/ascorbate-dependent oxidoreductase family (362 aa)
     
 
  0.557
LOC544150
Dihydroflavonol 4-reductase; Bifunctional enzyme involved in flavonoid metabolism (379 aa)
     
   
  0.542
Solyc04g080110.2.1
annotation not available (154 aa)
           
  0.520
101253278
annotation not available (343 aa)
           
  0.520
101262902
annotation not available (342 aa)
       
 
  0.466
101251160
annotation not available (342 aa)
       
 
  0.466
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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