STRINGSTRING
Solyc10g087030.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc10g087030.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc10g087030.1.1Uncharacterized protein (511 aa)    
Predicted Functional Partners:
Solyc07g025370.2.1
Uncharacterized protein (503 aa)
   
     
  0.662
Solyc10g080870.2.1
Uncharacterized protein (510 aa)
   
     
  0.661
Solyc02g094860.1.1
Uncharacterized protein (516 aa)
   
     
  0.661
Solyc02g085880.1.1
Uncharacterized protein (496 aa)
   
     
  0.661
Solyc10g007930.2.1
Uncharacterized protein (390 aa)
   
     
  0.660
Solyc10g007900.2.1
Uncharacterized protein (390 aa)
   
     
  0.659
Solyc03g019870.2.1
Uncharacterized protein (480 aa)
   
     
  0.652
Solyc02g093540.2.1
Uncharacterized protein (477 aa)
   
     
  0.638
Solyc08g080430.1.1
Uncharacterized protein (476 aa)
   
     
  0.625
Solyc11g068430.1.1
Putative ferredoxin (124 aa)
     
  0.570
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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