STRINGSTRING
Solyc11g005660.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g005660.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g005660.1.1Uncharacterized protein (280 aa)    
Predicted Functional Partners:
Solyc06g072980.2.1
Uncharacterized protein (564 aa)
     
  0.989
Solyc03g096790.2.1
Uncharacterized protein (604 aa)
     
  0.989
Solyc02g076720.2.1
Uncharacterized protein (1459 aa)
       
      0.901
Solyc01g107270.2.1
Uncharacterized protein (1333 aa)
       
      0.901
Solyc02g090330.2.1
Uncharacterized protein (228 aa)
     
  0.894
Solyc02g065180.2.1
Uncharacterized protein (217 aa)
     
  0.894
Solyc09g037010.1.1
Uncharacterized protein (205 aa)
     
  0.877
Solyc03g051700.1.1
Uncharacterized protein (199 aa)
     
  0.877
Solyc01g109080.2.1
Uncharacterized protein (3719 aa)
     
  0.877
Solyc01g106860.2.1
Uncharacterized protein (84 aa)
     
  0.877
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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