STRINGSTRING
101243947 protein (Solanum lycopersicum) - STRING interaction network
"101243947" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101243947annotation not available (420 aa)    
Predicted Functional Partners:
101253450
ARM repeat superfamily protein (461 aa)
     
      0.699
Solyc01g090420.2.1
annotation not available (721 aa)
           
  0.648
Solyc04g082570.2.1
annotation not available (772 aa)
           
  0.572
101268735
Armadillo/beta-catenin repeat family protein / kinesin motor family protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family (1084 aa)
           
  0.556
Solyc03g034010.2.1
annotation not available (144 aa)
           
  0.436
101257234
annotation not available (103 aa)
           
  0.412
101246449
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (167 aa)
           
  0.410
Solyc03g121310.2.1
Ubiquitin-conjugating enzyme family protein (246 aa)
           
  0.410
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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