STRINGSTRING
Solyc11g006190.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g006190.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g006190.1.1Uncharacterized protein (337 aa)    
Predicted Functional Partners:
WARS
tryptophan--tRNA ligase, cytoplasmic (403 aa)
           
  0.545
Solyc04g007350.2.1
Uncharacterized protein (259 aa)
           
  0.517
Solyc08g074790.2.1
Eukaryotic translation initiation factor 3 subunit 4 (295 aa)
           
  0.510
Solyc03g096680.1.1
Eukaryotic translation initiation factor 3 subunit 4 (295 aa)
           
  0.510
Solyc08g074860.1.1
Uncharacterized protein (410 aa)
           
  0.404
Solyc08g074840.1.1
Uncharacterized protein (244 aa)
           
  0.404
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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