STRINGSTRING
Solyc11g006300.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g006300.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g006300.1.1Uncharacterized protein (272 aa)    
Predicted Functional Partners:
Solyc11g073130.1.1
Uncharacterized protein (215 aa)
         
    0.900
Solyc04g014370.2.1
Uncharacterized protein (221 aa)
         
    0.900
Solyc01g094550.2.1
Uncharacterized protein (428 aa)
         
    0.900
Solyc01g094530.2.1
Uncharacterized protein (428 aa)
         
    0.900
Solyc05g054490.2.1
Uncharacterized protein (310 aa)
         
0.806
Solyc08g081220.1.1
Uncharacterized protein (554 aa)
         
  0.804
Solyc06g076800.2.1
Uncharacterized protein (521 aa)
         
  0.804
Solyc02g014730.2.1
Uncharacterized protein (557 aa)
         
  0.804
Solyc01g094750.2.1
Uncharacterized protein (526 aa)
         
  0.804
Solyc12g096930.1.1
Uncharacterized protein (245 aa)
         
    0.800
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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