STRINGSTRING
Solyc11g006350.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g006350.1.1" - Aspartate carbamoyltransferase in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g006350.1.1Aspartate carbamoyltransferase (377 aa)    
Predicted Functional Partners:
Solyc03g115630.2.1
Uncharacterized protein (426 aa)
  0.999
Solyc06g075340.2.1
Uncharacterized protein (1195 aa)
  0.999
Solyc11g068830.1.1
Uncharacterized protein (477 aa)
   
 
  0.994
Solyc02g076720.2.1
Uncharacterized protein (1459 aa)
   
 
  0.992
Solyc01g107270.2.1
Uncharacterized protein (1333 aa)
   
 
  0.992
Solyc11g064920.1.1
Uncharacterized protein (534 aa)
   
  0.989
Solyc02g078400.2.1
Uncharacterized protein (503 aa)
   
  0.989
ASS
Argininosuccinate synthase (494 aa)
   
 
  0.950
Solyc10g080320.1.1
Adenylosuccinate synthetase ; Plays an important role in the de novo pathway of purine nucleotide biosynthesis (507 aa)
   
 
  0.942
Solyc02g085520.2.1
Adenylosuccinate synthetase ; Plays an important role in the de novo pathway of purine nucleotide biosynthesis (581 aa)
   
 
  0.942
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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