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LOC544088 protein (Solanum lycopersicum) - STRING interaction network
"LOC544088" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC544088Uncharacterized protein; Aspartate carbamoyltransferase ; Belongs to the ATCase/OTCase family (377 aa)    
Predicted Functional Partners:
ASS
Arginosuccinate synthase family (494 aa)
   
  0.998
101258052
Uncharacterized protein; Carbamoyl phosphate synthetase A (426 aa)
 
 
  0.995
Solyc06g075340.2.1
Uncharacterized protein; Carbamoyl phosphate synthetase B (1195 aa)
 
 
  0.994
101261880
Uncharacterized protein; Pyrimidine 2 (534 aa)
   
 
  0.989
101244927
Uncharacterized protein; Uridine 5’-monophosphate synthase / UMP synthase (PYRE-F) (UMPS) (477 aa)
   
   
  0.987
101258802
Adenylosuccinate synthetase, chloroplastic; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP (507 aa)
   
 
  0.963
BAC19.7
Adenylosuccinate synthetase, chloroplastic; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP (581 aa)
   
 
  0.963
101256508
Uncharacterized protein; GMP synthase (glutamine-hydrolyzing), putative / glutamine amidotransferase, putative (536 aa)
   
   
  0.957
101268785
Dihydroorotate dehydrogenase (quinone), mitochondrial; Pyrimidine d; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily (457 aa)
   
 
  0.956
AS1
Uncharacterized protein; Asparagine synthetase (590 aa)
   
 
  0.954
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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