STRINGSTRING
Solyc11g006560.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g006560.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g006560.1.1Uncharacterized protein (484 aa)    
Predicted Functional Partners:
Solyc07g064810.2.1
Uncharacterized protein (588 aa)
   
 
  0.677
Solyc11g005760.1.1
Hexosyltransferase (569 aa)
     
  0.623
Solyc08g078650.2.1
Uncharacterized protein (469 aa)
     
  0.623
Solyc06g060710.2.1
Uncharacterized protein (385 aa)
     
  0.623
Solyc05g055040.2.1
Hexosyltransferase (533 aa)
     
  0.623
Solyc04g078990.2.1
Hexosyltransferase (576 aa)
     
  0.623
Solyc04g078980.2.1
Hexosyltransferase (564 aa)
     
  0.623
Solyc04g064790.2.1
Hexosyltransferase (648 aa)
     
  0.623
Solyc04g009920.2.1
Hexosyltransferase (533 aa)
     
  0.623
GolS2
Galactinol synthase ; Galactinol synthase involved in the biosynthesis of raffinose family oligosaccharides (RFOs) that function as osmoprotectants. May promote plant stress tolerance (By similarity) (337 aa)
     
  0.623
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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