STRINGSTRING
Solyc11g006590.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g006590.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g006590.1.1Uncharacterized protein (497 aa)    
Predicted Functional Partners:
Solyc10g007930.2.1
Uncharacterized protein (390 aa)
   
     
  0.660
Solyc10g007900.2.1
Uncharacterized protein (390 aa)
   
     
  0.660
Solyc11g068430.1.1
Putative ferredoxin (124 aa)
     
  0.570
Solyc11g065640.1.1
Uncharacterized protein (216 aa)
     
  0.570
Solyc11g006910.1.1
Uncharacterized protein (125 aa)
     
  0.570
Solyc10g075160.1.1
Ferredoxin II (144 aa)
     
  0.570
SEND33
Ferredoxin-1, chloroplastic ; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions (144 aa)
     
  0.570
Solyc08g083360.2.1
Uncharacterized protein (192 aa)
     
  0.570
Solyc08g077050.2.1
Uncharacterized protein (191 aa)
     
  0.570
Solyc05g055280.1.1
Uncharacterized protein (98 aa)
     
  0.570
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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