STRINGSTRING
Solyc11g006820.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g006820.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g006820.1.1Uncharacterized protein (81 aa)    
Predicted Functional Partners:
Solyc10g081370.1.1
Uncharacterized protein ; Probable common Sm protein, is found in U1 and U2 snRNPs and may be part of the spliceosome (88 aa)
     
  0.999
Solyc06g072280.2.1
Uncharacterized protein (88 aa)
     
  0.998
Solyc03g098470.2.1
Uncharacterized protein (88 aa)
     
  0.998
Solyc06g073700.2.1
Uncharacterized protein (98 aa)
     
  0.995
Solyc10g078450.1.1
Uncharacterized protein (44 aa)
     
  0.995
Solyc09g064660.2.1
Uncharacterized protein (114 aa)
     
  0.994
Solyc06g084310.2.1
Annotation not available (114 aa)
     
  0.994
Solyc09g091500.2.1
Uncharacterized protein (88 aa)
     
  0.993
Solyc11g005370.1.1
Uncharacterized protein (97 aa)
     
  0.992
Solyc03g033600.2.1
Uncharacterized protein (132 aa)
     
  0.991
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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