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STRINGSTRING
101252835 protein (Solanum lycopersicum) - STRING interaction network
"101252835" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101252835Uncharacterized protein; HhH-GPD base excision DNA repair family protein (1869 aa)    
Predicted Functional Partners:
Solyc07g062430.2.1
Uncharacterized protein; Phosphoesterase (343 aa)
       
 
  0.875
RPD1
Uncharacterized protein; DNA-directed RNA polymerase (1206 aa)
       
 
  0.748
Solyc03g111600.2.1
DNA-(apurinic or apyrimidinic site) lyase; DNAse I-like superfamily protein (377 aa)
     
 
  0.744
101263628
Uncharacterized protein; DNA methyltransferase-2; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family (381 aa)
     
   
  0.734
101259606
dsRNA-binding protein 2 (414 aa)
           
  0.730
101267262
Uncharacterized protein; RNA binding;abscisic acid binding (743 aa)
           
  0.730
101262870
annotation not available (487 aa)
       
 
  0.699
101260172
Uncharacterized protein; Homolog of bacterial PANC (314 aa)
         
  0.670
101257206
Uncharacterized protein; APRATAXIN-like (746 aa)
       
 
  0.614
MSI1
WD-40 repeat-containing protein MSI1 (424 aa)
     
   
  0.591
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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