STRINGSTRING
101257326 protein (Solanum lycopersicum) - STRING interaction network
"101257326" - annotation not available in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101257326annotation not available (343 aa)    
Predicted Functional Partners:
Solyc07g026640.1.1
Uncharacterized protein; CONTAINS InterPro DOMAIN/s- Fanconi Anaemia group E protein, C-terminal (InterPro-IPR021025); Has 41 Blast hits to 41 proteins in 17 species- Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 4 (source- /.../Link) (545 aa)
           
  0.672
101265770
Unknown protein; Has 28 Blast hits to 26 proteins in 11 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (459 aa)
           
  0.669
Solyc09g005200.2.1
Unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- endomembrane system; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 13 growth stages; BEST Arabidopsis thaliana protein match is- u /.../ protein (TAIR-AT1G65295.1); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (136 aa)
           
  0.669
101267824
ARM repeat superfamily protein (569 aa)
           
  0.668
101268001
RING/U-box superfamily protein (272 aa)
           
  0.668
101267938
Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- mitochondrion; CONTAINS InterPro DOMAIN/s- Metal-dependent phosphohydrolase, HD subdomain (InterPro-IPR006674), Ppx/GppA phosphatase (InterPro-IPR003695); /.../0201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (563 aa)
           
  0.648
101261405
Uncharacterized protein; GDSL-motif lipase/hydrolase 6; Belongs to the ’GDSL’ lipolytic enzyme family (365 aa)
           
  0.647
Solyc03g043870.2.1
Uncharacterized protein; Zinc ion binding (286 aa)
           
  0.647
Solyc01g097110.1.1
Unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast; EXPRESSED IN- 14 plant structures; EXPRESSED DURING- 6 growth stages; Has 257 Blast hits to 164 proteins in 70 species- Arch /.../; Bacteria - 4; Metazoa - 189; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 26 (source- NCBI BLink) (1500 aa)
           
  0.646
Solyc01g066610.2.1
Unknown protein; INVOLVED IN- biological_process unknown; LOCATED IN- cellular_component unknown; EXPRESSED IN- cultured cell; Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants /.../7; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (1430 aa)
           
  0.645
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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