STRINGSTRING
Solyc11g007780.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g007780.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g007780.1.1Uncharacterized protein (384 aa)    
Predicted Functional Partners:
Solyc06g009660.2.1
Uncharacterized protein (193 aa)
       
  0.951
Solyc01g100350.2.1
Uncharacterized protein (193 aa)
       
  0.951
Solyc01g079540.2.1
Uncharacterized protein (193 aa)
       
  0.951
SAR2
GTP-binding protein SAR2 ; Involved in transport from the endoplasmic reticulum to the Golgi apparatus (193 aa)
       
  0.951
Solyc07g047970.2.1
Uncharacterized protein (391 aa)
         
0.800
Solyc08g067910.2.1
Uncharacterized protein (341 aa)
     
 
  0.686
Solyc07g054140.2.1
Uncharacterized protein (318 aa)
     
 
  0.686
Solyc11g068500.1.1
Uncharacterized protein (742 aa)
     
  0.677
Solyc02g082220.2.1
Uncharacterized protein (1030 aa)
     
  0.677
Solyc11g032010.1.1
Uncharacterized protein (202 aa)
     
  0.672
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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