• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc11g007790.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g007790.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g007790.1.1annotation not available (839 aa)    
Predicted Functional Partners:
101248708
annotation not available (254 aa)
       
  0.640
101249560
annotation not available (250 aa)
       
  0.640
101260623
annotation not available (313 aa)
         
    0.600
101250267
annotation not available (224 aa)
         
    0.600
101245216
Uncharacterized protein; NAD(P)-binding Rossmann-fold superfamily protein (308 aa)
           
  0.429
Solyc12g017420.1.1
ABC transporter family protein (705 aa)
           
  0.422
EO
2-methylene-furan-3-one reductase; Enone oxidoreductase involved in the biosynthesis of 4- hydroxy-2,5-dimethyl-3(2H)-furanone (HDMF or furaneol). Can use both NADH and NADPH as the electron donor (388 aa)
           
  0.422
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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