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STRINGSTRING
101258513 protein (Solanum lycopersicum) - STRING interaction network
"101258513" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101258513annotation not available (168 aa)    
Predicted Functional Partners:
Solyc07g006250.2.1
Uncharacterized protein; RNA polymerase Rpb7 N-terminal domain-containing protein (102 aa)
     
 
  0.994
Solyc08g075580.1.1
Uncharacterized protein; DNA binding;DNA-directed RNA polymerases (153 aa)
     
 
  0.993
101265201
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1390 aa)
     
 
  0.989
101257966
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (111 aa)
     
 
  0.988
101248458
annotation not available (393 aa)
     
 
  0.987
101259186
annotation not available (144 aa)
     
 
  0.978
101254492
annotation not available (371 aa)
     
 
  0.976
Solyc05g025650.2.1
Uncharacterized protein; RNA polymerase III RPC4 (200 aa)
     
 
  0.976
101251196
annotation not available (71 aa)
     
 
  0.974
101268675
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (121 aa)
     
 
  0.972
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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