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STRINGSTRING
101260292 protein (Solanum lycopersicum) - STRING interaction network
"101260292" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101260292annotation not available (838 aa)    
Predicted Functional Partners:
101251007
Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- keratin filament, chloroplast; CONTAINS InterPro DOMAIN/s- Keratin, high sulphur B2 protein (InterPro-IPR002494); Has 6153 Blast hits to 2882 proteins in /.../ecies- Archae - 6; Bacteria - 47; Metazoa - 4777; Fungi - 68; Plants - 187; Viruses - 30; Other Eukaryotes - 1038 (source- NCBI BLink) (209 aa)
           
  0.577
101262151
Uncharacterized protein; Proteolysis 1 (442 aa)
       
 
  0.466
101254702
annotation not available (737 aa)
       
 
  0.466
101268268
annotation not available (864 aa)
       
 
  0.466
101255836
Uncharacterized protein; Cullin-associated and neddylation dissociated (1217 aa)
           
  0.448
LOC543511
Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues; Belongs to the glycosyl hydrolase 16 family (330 aa)
           
  0.431
101249812
Uncharacterized protein; Copine (Calcium-dependent phospholipid-binding protein) family (437 aa)
           
  0.431
RFP1
annotation not available (492 aa)
           
  0.431
101260851
Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues; Belongs to the glycosyl hydrolase 16 family (335 aa)
           
  0.431
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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