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STRINGSTRING
mdh protein (Solanum lycopersicum) - STRING interaction network
"mdh" - Malate dehydrogenase in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mdhMalate dehydrogenase (442 aa)    
Predicted Functional Partners:
101260902
annotation not available (514 aa)
   
  0.988
101258079
annotation not available (511 aa)
   
  0.988
Solyc01g073740.2.1
annotation not available (474 aa)
   
  0.988
101255322
Phosphoribulokinase (400 aa)
   
 
  0.964
LOC543812
Uncharacterized protein; Phosphoenolpyruvate carboxykinase (662 aa)
     
 
  0.963
101260072
annotation not available (452 aa)
     
  0.959
101265278
annotation not available (494 aa)
   
  0.957
101246962
NAD-dependent malic enzyme 2 (601 aa)
   
  0.956
Solyc12g088160.1.1
annotation not available (651 aa)
     
 
  0.955
101246159
NAD-dependent malic enzyme 1 (626 aa)
   
  0.954
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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