STRINGSTRING
Solyc11g008050.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g008050.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g008050.1.1Uncharacterized protein (457 aa)    
Predicted Functional Partners:
Solyc11g008040.1.1
Uncharacterized protein (122 aa)
 
 
  0.891
Solyc04g082400.2.1
Uncharacterized protein (844 aa)
   
 
  0.824
Solyc09g009190.2.1
Uncharacterized protein (876 aa)
   
 
  0.781
Solyc07g064830.2.1
Uncharacterized protein (903 aa)
   
 
  0.781
Solyc03g065340.2.1
Alpha-1,4 glucan phosphorylase ; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (966 aa)
 
 
  0.748
Solyc09g064800.1.1
Uncharacterized protein (866 aa)
   
     
  0.736
Solyc02g071040.2.1
Starch synthase IV (1001 aa)
   
   
  0.718
Solyc05g007070.2.1
Alpha-amylase (892 aa)
   
 
  0.714
Solyc02g066950.2.1
Uncharacterized protein (905 aa)
   
 
  0.714
Solyc04g053120.2.1
Disproportionating enzyme (572 aa)
   
 
  0.713
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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