STRINGSTRING
Solyc11g008290.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g008290.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g008290.1.1Uncharacterized protein (272 aa)    
Predicted Functional Partners:
Solyc01g104840.2.1
Uncharacterized protein (223 aa)
   
 
  0.784
Solyc07g066060.2.1
Uncharacterized protein (313 aa)
       
      0.720
Solyc06g054380.2.1
Uncharacterized protein (168 aa)
   
 
  0.698
Solyc10g084630.1.1
Uncharacterized protein (138 aa)
   
 
  0.690
Solyc06g035610.2.1
Uncharacterized protein (144 aa)
   
 
  0.664
Solyc03g121710.2.1
Uncharacterized protein (269 aa)
   
 
  0.628
Solyc11g072180.1.1
Uncharacterized protein (90 aa)
       
      0.625
Solyc01g008990.2.1
Uncharacterized protein (246 aa)
       
      0.625
Solyc05g017890.2.1
Uncharacterized protein (1858 aa)
       
      0.602
Solyc03g071560.2.1
Uncharacterized protein (314 aa)
   
 
0.580
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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