STRINGSTRING
Solyc11g008360.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g008360.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g008360.1.1Uncharacterized protein (414 aa)    
Predicted Functional Partners:
Solyc04g081920.2.1
Uncharacterized protein (431 aa)
 
  0.584
Solyc11g065870.1.1
Uncharacterized protein (645 aa)
 
   
  0.530
Solyc05g056260.2.1
Uncharacterized protein (342 aa)
   
 
  0.525
Solyc02g080320.2.1
Uncharacterized protein (483 aa)
   
  0.499
Solyc07g042750.2.1
Uncharacterized protein (475 aa)
   
  0.489
Solyc03g097550.2.1
Pseudouridine synthase ; Responsible for synthesis of pseudouridine from uracil (383 aa)
   
  0.489
Solyc02g062520.2.1
Uncharacterized protein (379 aa)
   
  0.489
Solyc01g107580.2.1
Uncharacterized protein (467 aa)
   
  0.489
Solyc01g100400.2.1
Uncharacterized protein (338 aa)
   
  0.489
NIA
Nitrate reductase [NADH] ; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (912 aa)
   
        0.483
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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