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STRINGSTRING
101243758 protein (Solanum lycopersicum) - STRING interaction network
"101243758" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101243758annotation not available (414 aa)    
Predicted Functional Partners:
101245909
Uncharacterized protein; RNA binding;GTP binding; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin- like GTPase superfamily. Era GTPase family (438 aa)
   
   
  0.933
101262377
annotation not available (338 aa)
   
        0.759
Solyc01g057060.1.1
annotation not available (91 aa)
   
        0.759
101261433
Translation protein SH3-like family protein; Belongs to the universal ribosomal protein uL24 family (189 aa)
   
 
  0.723
101256043
CLP protease proteolytic subunit 1; Belongs to the peptidase S14 family (384 aa)
     
   
  0.715
101266453
Uncharacterized protein; transferases;tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferases (484 aa)
   
   
  0.702
101257826
GTP-binding family protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin- like GTPase superfamily. Era GTPase family (440 aa)
   
   
  0.695
Solyc01g008310.2.1
tRNA synthetase beta subunit family protein (576 aa)
         
  0.656
101249052
Elongation factor family protein (672 aa)
   
   
  0.651
Solyc04g050520.2.1
annotation not available (1340 aa)
     
   
  0.650
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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