STRINGSTRING
Solyc11g008380.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g008380.1.1" - Glycerol-3-phosphate dehydrogenase in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g008380.1.1Glycerol-3-phosphate dehydrogenase (406 aa)    
Predicted Functional Partners:
Solyc08g082340.2.1
Uncharacterized protein (371 aa)
     
 
  0.909
Solyc04g011600.2.1
Uncharacterized protein (491 aa)
         
  0.900
Solyc09g014350.2.1
Uncharacterized protein (504 aa)
         
  0.900
GPAT
Glycerol-3-phosphate acyltransferase (470 aa)
         
    0.900
Solyc07g056320.2.1
Uncharacterized protein (546 aa)
         
    0.900
Solyc05g053030.1.1
Uncharacterized protein (502 aa)
         
    0.900
Solyc03g112080.1.1
Uncharacterized protein (319 aa)
         
    0.900
Solyc01g094700.2.1
Uncharacterized protein (501 aa)
         
    0.900
Solyc03g117490.2.1
Uncharacterized protein (522 aa)
 
  0.892
dhbK
Putative 3,4-dihydroxy-2-butanone kinase (594 aa)
       
  0.867
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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