STRINGSTRING
Solyc11g008420.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g008420.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g008420.1.1Uncharacterized protein (189 aa)    
Predicted Functional Partners:
Solyc12g009120.1.1
Uncharacterized protein (116 aa)
     
  0.974
Solyc06g062940.2.1
Uncharacterized protein (118 aa)
     
  0.974
Solyc06g073650.1.1
Uncharacterized protein (540 aa)
       
  0.971
Solyc09g074680.2.1
Uncharacterized protein (740 aa)
     
  0.900
Solyc09g010050.1.1
Uncharacterized protein (735 aa)
     
  0.900
Solyc06g084520.2.1
Uncharacterized protein (740 aa)
     
  0.900
Solyc06g008710.1.1
Uncharacterized protein (743 aa)
     
  0.900
Solyc06g008080.1.1
Uncharacterized protein (306 aa)
     
  0.900
Solyc05g018040.1.1
Uncharacterized protein (251 aa)
     
  0.900
Solyc02g087900.2.1
Uncharacterized protein (733 aa)
     
  0.900
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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