STRINGSTRING
Solyc11g008460.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g008460.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g008460.1.1Uncharacterized protein (404 aa)    
Predicted Functional Partners:
Solyc07g054200.2.1
Uncharacterized protein (753 aa)
     
  0.981
Solyc09g075130.2.1
Uncharacterized protein (109 aa)
       
  0.970
Solyc04g016510.2.1
Uncharacterized protein (488 aa)
     
  0.969
Solyc09g090660.2.1
Uncharacterized protein (521 aa)
     
  0.969
Solyc08g078430.2.1
Uncharacterized protein (483 aa)
     
  0.968
Solyc07g064070.1.1
Uncharacterized protein (453 aa)
     
  0.968
Solyc01g094310.1.1
Uncharacterized protein (91 aa)
     
  0.968
Solyc01g094300.1.1
Uncharacterized protein (217 aa)
     
  0.968
Solyc11g005110.1.1
Uncharacterized protein (523 aa)
     
  0.966
Solyc06g069480.2.1
Uncharacterized protein (2088 aa)
     
  0.964
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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