STRINGSTRING
Solyc11g008540.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g008540.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g008540.1.1Uncharacterized protein (1352 aa)    
Predicted Functional Partners:
AGO1-1
Argonaute 1 (1054 aa)
     
  0.871
AGO1B
Argonaute 1 (980 aa)
     
  0.871
Solyc02g069270.2.1
Uncharacterized protein (977 aa)
     
  0.871
AGO2A
Argonaute 2A (1042 aa)
     
  0.871
AGO7
Argonaute 7 (1000 aa)
     
  0.870
AGO10
Protein argonaute 10 (933 aa)
     
  0.855
Solyc11g069100.1.1
Uncharacterized protein (170 aa)
     
  0.855
Solyc10g054920.1.1
Uncharacterized protein (104 aa)
     
  0.855
Solyc09g082830.2.1
Uncharacterized protein (982 aa)
     
  0.855
Solyc09g064880.1.1
Uncharacterized protein (58 aa)
     
  0.855
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (12%) [HD]