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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc11g008610.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g008610.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g008610.1.1annotation not available (393 aa)    
Predicted Functional Partners:
RSI-1
Protein RSI-1 ; Belongs to the GASA family (96 aa)
           
  0.578
101249195
Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)- L-lysine intermediate to form hypusine, an essential post- translational modification only found in mature eIF-5A factor; Belongs to the deoxyhypusine hydroxylase family (334 aa)
           
  0.520
101246417
Uncharacterized protein; Phosphoribosylformylglycinamidine cyclo-ligase, chloroplast / phosphoribosyl-aminoimidazole synthetase / AIR synthase (PUR5) (404 aa)
         
  0.475
101265372
Uncharacterized protein; Glycinamide ribonucleotide (GAR) synthetase (514 aa)
         
  0.475
101267311
Phosphate transporter; Sodium-phosphate symporter which plays a fundamental housekeeping role in phosphate transport (577 aa)
         
  0.471
Solyc05g007150.2.1
annotation not available (349 aa)
     
   
  0.457
101252106
annotation not available (333 aa)
     
   
  0.457
101258865
annotation not available (551 aa)
           
  0.449
Solyc12g010990.1.1
annotation not available (531 aa)
     
   
  0.436
101260154
annotation not available (486 aa)
     
   
  0.436
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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